Carrol Armfield спросил 2 года назад
Entosaceus ATCC 25745, P. pentosaceus SL4 and P. pentosaceus IE-Characterization Locus_tag Size (bp) Product description Identity (BLASTx) Max. identity to proteins of ATCC SL4 ( ) IE-3 ( ) other species 25745 ( ) (BLASTp) ( ) 99.25 99.60 99.29 99.86 99.78 99.81 100 99.86 99.34 100 99.79 99.07 99.11 99.78 98.82 98.85 99.26 99.22 98.87 100 95.39 99.76 100 99.89 100 100 99.86 99.12 100 99.79 99.77 99.11 100 99.83 99.82 100 99.61 100 100 69.50 92.46 84.89 96.16 87.95 90.53 87.14 96.22 68.42 90.67 70.70 99.30 93.24 91.21 72.60 88.56 94.81 81.87 38.89 83.76 99.74 99.76 99.86 99.89 99.81 100 100 99.12 100 99.37 99.54 99.33 99.78 98.32 99.03 100 99.22 99.64 99.Bile tolerance Acid toleranceBB06_RS0100955 1,026 BB06_RS0107040 1,518 BB06_RS0107025 420 BB06_RS0107030 1,410 BB06_RS0107035 921 BB06_RS0107050 522 BB06_RS0107055 213 BB06_RS0107060Choloylglycine hydrolase family protein 99.05 F0F1 ATP synthase subunit alpha F0F1 ATP synthase subunit epsilon F0F1 ATP synthase subunit beta F0F1 ATP synthase subunit gamma F0F1 ATP synthase subunit B F0F1 ATP synthase subunit C F0F1 ATP synthase subunit A Universal stress protein UspA Universal stress protein UspA Universal stress protein UspA Universal stress protein UspA Universal stress protein UspA Universal stress protein UspA GrpE protein Molecular chaperone DnaJ Molecular chaperone GroEL Methionine sulfoxide reductase A Enterocin A Immunity family protein Arsenate reductaseUniversal stress resistanceBB06_RS0103670 453 BB06_RS0106945 456 BB06_RS0101810 474 BB06_RS0100900 432 BB06_RS0101815 450 BB06_RS0102220Hyperosmotic and heat resistanceBB06_RS0104860 594 BB06_RS0104870 1,Environmental stress resistance BB06_RS0102555 1,620 Oxidative stress resistance Enterocin A resistance Arsenate resistanceNote: «-«, not detected.BB06_RS0105175 516 BB06_RS0101010 279 BB06_RS0105725the genes and coding proteins related to the peptidoglycan pathway were conserved in the four strains of P. pentosaceus, they were not significantly similar to those of the other species. These findings will contribute to the elucidation of the mechanisms of immune regulation in P. pentosaceus LI05.Comparisons with other fully sequenced genomesFifty-three proteins encoded by P. pentosaceus LI05 genes were not detected or had sequence similarities of less than 50 in the comparative analysis with the three known food-borne strains, P. pentosaceus ATCC 25745, SL4 and IE-3. Among these proteins, 21 hypothetical proteins with Nelfinavir (Mesylate) no clear functions were not further analyzed; the other 32 proteins are listed in Table 4, demonstrated in Figure 3, and further discussed below. Five putative exopolysaccharide biosynthesis proteins were detected only in P. pentosaceus LI05, including an epimerase, a capsular polysaccharide biosynthesis protein, two glycosyltransferases (key enzymes for the biosyntheses of the exopolysaccharide repeating units) and a polysaccharide biosynthesis protein. Four of these enzymes need to be examined in further detail becausethey are not only potentially novel but also probably induce variations in the structures of their encoded polysaccharides that may have influenced adherence, biofilm formation and the nature of the immune response [27]. P. pentosaceus LI05 was characterized by three extraenvironmental stress tolerance proteins, including a putative ferritin-like DNA-binding protein, which maintains a steady state of iron ions and PubMed ID:https://www.ncbi.nlm.nih.gov/pubmed/7500280 responds to stresses, such as those involving temperature, humidity, and ionizing and red.
